Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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System Development (GO:0048731) Genes Targeted by hsa-mir-1255a in CA Breast Sorlie Cluster 8 Table contains all genes in the CA Breast Sorlie cluster number 8. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1255a GO:0048731 467 ATF3 activating transcription factor 3 [Source:HGNC Symbol;Acc:785] zzz999 4240 MFGE8 milk fat globule-EGF factor 8 protein [Source:HGNC Symbol;Acc:7036] zzz999 Yes 90850 ZNF598 zinc finger protein 598 [Source:HGNC Symbol;Acc:28079] zzz999 22808 MRAS muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:7227] T Yes 2592 GALT galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:4135] zzz999 2568 GABRP gamma-aminobutyric acid (GABA) A receptor, pi [Source:HGNC Symbol;Acc:4089] zzz999 6383 SDC2 syndecan 2 [Source:HGNC Symbol;Acc:10659] zzz999 Yes 10810 WASF3 WAS protein family, member 3 [Source:HGNC Symbol;Acc:12734] zzz999 10026 PIGK phosphatidylinositol glycan anchor biosynthesis, class K [Source:HGNC Symbol;Acc:8965] zzz999 51768 TM7SF3 transmembrane 7 superfamily member 3 [Source:HGNC Symbol;Acc:23049] zzz999 2119 ETV5 ets variant 5 [Source:HGNC Symbol;Acc:3494] zzz999 Yes 1676 DFFA DNA fragmentation factor, 45kDa, alpha polypeptide [Source:HGNC Symbol;Acc:2772] zzz999 6376 CX3CL1 chemokine (C-X3-C motif) ligand 1 [Source:HGNC Symbol;Acc:10647] T Yes 2114 ETS2 v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) [Source:HGNC Symbol;Acc:3489] zzz999 Yes 4071 TM4SF1 transmembrane 4 L six family member 1 [Source:HGNC Symbol;Acc:11853] zzz999 50809 HP1BP3 heterochromatin protein 1, binding protein 3 [Source:HGNC Symbol;Acc:24973] zzz999 1308 COL17A1 collagen, type XVII, alpha 1 [Source:HGNC Symbol;Acc:2194] zzz999 Yes 140885 SIRPA signal-regulatory protein alpha [Source:HGNC Symbol;Acc:9662] T 220988 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941] zzz999 2523 FUT1 fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group) [Source:HGNC Symbol;Acc:4012] T 222865 TMEM130 transmembrane protein 130 [Source:HGNC Symbol;Acc:25429] T 2824 GPM6B glycoprotein M6B [Source:HGNC Symbol;Acc:4461] zzz999 Yes 55205 ZNF532 zinc finger protein 532 [Source:HGNC Symbol;Acc:30940] zzz999 6443 SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) [Source:HGNC Symbol;Acc:10806] T Yes 6868 ADAM17 ADAM metallopeptidase domain 17 [Source:HGNC Symbol;Acc:195] zzz999 Yes 23189 KANK1 KN motif and ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:19309] zzz999 5236 PGM1 phosphoglucomutase 1 [Source:HGNC Symbol;Acc:8905] zzz999 25875 LETMD1 LETM1 domain containing 1 [Source:HGNC Symbol;Acc:24241] zzz999 2354 FOSB FBJ murine osteosarcoma viral oncogene homolog B [Source:HGNC Symbol;Acc:3797] T 23384 SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like [Source:HGNC Symbol;Acc:29022] zzz999 9572 NR1D1 nuclear receptor subfamily 1, group D, member 1 [Source:HGNC Symbol;Acc:7962] zzz999 140467 ZNF358 zinc finger protein 358 [Source:HGNC Symbol;Acc:16838] zzz999 Yes 84649 DGAT2 diacylglycerol O-acyltransferase 2 [Source:HGNC Symbol;Acc:16940] zzz999 23235 SIK2 salt-inducible kinase 2 [Source:HGNC Symbol;Acc:21680] zzz999 23650 TRIM29 tripartite motif containing 29 [Source:HGNC Symbol;Acc:17274] zzz999 57209 ZNF248 zinc finger protein 248 [Source:HGNC Symbol;Acc:13041] zzz999 83595 SOX7 SRY (sex determining region Y)-box 7 [Source:HGNC Symbol;Acc:18196] zzz999 79906 MORN1 MORN repeat containing 1 [Source:HGNC Symbol;Acc:25852] zzz999 9475 ROCK2 Rho-associated, coiled-coil containing protein kinase 2 [Source:HGNC Symbol;Acc:10252] zzz999 Yes 6876 TAGLN transgelin [Source:HGNC Symbol;Acc:11553] zzz999 Yes 220 ALDH1A3 aldehyde dehydrogenase 1 family, member A3 [Source:HGNC Symbol;Acc:409] T Yes 23318 ZCCHC11 zinc finger, CCHC domain containing 11 [Source:HGNC Symbol;Acc:28981] zzz999 634 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) [Source:HGNC Symbol;Acc:1814] T Yes 3655 ITGA6 integrin, alpha 6 [Source:HGNC Symbol;Acc:6142] zzz999 Yes 3726 JUNB jun B proto-oncogene [Source:HGNC Symbol;Acc:6205] zzz999 Yes 8620 NPFF neuropeptide FF-amide peptide precursor [Source:HGNC Symbol;Acc:7901] zzz999 255626 HIST1H2BA histone cluster 1, H2ba [Source:HGNC Symbol;Acc:18730] zzz999 3164 NR4A1 nuclear receptor subfamily 4, group A, member 1 [Source:HGNC Symbol;Acc:7980] zzz999 3815 KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog [Source:HGNC Symbol;Acc:6342] zzz999 Yes 1410 CRYAB crystallin, alpha B [Source:HGNC Symbol;Acc:2389] zzz999 Yes 9645 MICAL2 microtubule associated monoxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:24693] zzz999 1959 EGR2 early growth response 2 [Source:HGNC Symbol;Acc:3239] zzz999 Yes 4323 MMP14 matrix metallopeptidase 14 (membrane-inserted) [Source:HGNC Symbol;Acc:7160] zzz999 Yes 3852 KRT5 keratin 5 [Source:HGNC Symbol;Acc:6442] zzz999 Yes 7030 TFE3 transcription factor binding to IGHM enhancer 3 [Source:HGNC Symbol;Acc:11752] T 57468 SLC12A5 solute carrier family 12 (potassium/chloride transporter), member 5 [Source:HGNC Symbol;Acc:13818] T 5915 RARB retinoic acid receptor, beta [Source:HGNC Symbol;Acc:9865] zzz999 Yes 5740 PTGIS prostaglandin I2 (prostacyclin) synthase [Source:HGNC Symbol;Acc:9603] T 23710 GABARAPL1 GABA(A) receptor-associated protein like 1 [Source:HGNC Symbol;Acc:4068] T 6288 SAA1 serum amyloid A1 [Source:HGNC Symbol;Acc:10513] zzz999 9159 PCSK7 proprotein convertase subtilisin/kexin type 7 [Source:HGNC Symbol;Acc:8748] zzz999 2669 GEM GTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:4234] zzz999 9314 KLF4 Kruppel-like factor 4 (gut) [Source:HGNC Symbol;Acc:6348] zzz999 79365 BHLHE41 basic helix-loop-helix family, member e41 [Source:HGNC Symbol;Acc:16617] T Yes 2920 CXCL2 chemokine (C-X-C motif) ligand 2 [Source:HGNC Symbol;Acc:4603] zzz999 23187 PHLDB1 pleckstrin homology-like domain, family B, member 1 [Source:HGNC Symbol;Acc:23697] zzz999 55862 ECHDC1 enoyl CoA hydratase domain containing 1 [Source:HGNC Symbol;Acc:21489] zzz999 23450 SF3B3 splicing factor 3b, subunit 3, 130kDa [Source:HGNC Symbol;Acc:10770] zzz999 6710 SPTB spectrin, beta, erythrocytic [Source:HGNC Symbol;Acc:11274] zzz999 Yes 8324 FZD7 frizzled homolog 7 (Drosophila) [Source:HGNC Symbol;Acc:4045] T Yes 9828 ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17 [Source:HGNC Symbol;Acc:21726] zzz999 25 ABL1 c-abl oncogene 1, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:76] zzz999 Yes 3725 JUN jun proto-oncogene [Source:HGNC Symbol;Acc:6204] zzz999 Yes 222166 C7orf41 chromosome 7 open reading frame 41 [Source:HGNC Symbol;Acc:25457] T 3749 KCNC4 potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:HGNC Symbol;Acc:6236] zzz999 5649 RELN reelin [Source:HGNC Symbol;Acc:9957] zzz999 Yes 9639 ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 [Source:HGNC Symbol;Acc:14103] zzz999 1808 DPYSL2 dihydropyrimidinase-like 2 [Source:HGNC Symbol;Acc:3014] T Yes 2982 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 [Source:HGNC Symbol;Acc:4685] zzz999 9563 H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:HGNC Symbol;Acc:4795] T 6590 SLPI secretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:11092] zzz999 7071 KLF10 Kruppel-like factor 10 [Source:HGNC Symbol;Acc:11810] zzz999 Yes 3727 JUND jun D proto-oncogene [Source:HGNC Symbol;Acc:6206] zzz999 3691 ITGB4 integrin, beta 4 [Source:HGNC Symbol;Acc:6158] zzz999 10144 FAM13A family with sequence similarity 13, member A [Source:HGNC Symbol;Acc:19367] zzz999 6573 SLC19A1 solute carrier family 19 (folate transporter), member 1 [Source:HGNC Symbol;Acc:10937] zzz999 5578 PRKCA protein kinase C, alpha [Source:HGNC Symbol;Acc:9393] T Yes 352954 GATS GATS, stromal antigen 3 opposite strand [Source:HGNC Symbol;Acc:29954] zzz999 56204 KIAA1370 KIAA1370 [Source:HGNC Symbol;Acc:25609] zzz999 2180 ACSL1 acyl-CoA synthetase long-chain family member 1 [Source:HGNC Symbol;Acc:3569] zzz999 9322 TRIP10 thyroid hormone receptor interactor 10 [Source:HGNC Symbol;Acc:12304] zzz999 3983 ABLIM1 actin binding LIM protein 1 [Source:HGNC Symbol;Acc:78] T Yes 9592 IER2 immediate early response 2 [Source:HGNC Symbol;Acc:28871] zzz999 10010 TANK TRAF family member-associated NFKB activator [Source:HGNC Symbol;Acc:11562] zzz999 604 BCL6 B-cell CLL/lymphoma 6 [Source:HGNC Symbol;Acc:1001] P T Yes 219988 PATL1 protein associated with topoisomerase II homolog 1 (yeast) [Source:HGNC Symbol;Acc:26721] T 89797 NAV2 neuron navigator 2 [Source:HGNC Symbol;Acc:15997] T Yes 2534 FYN FYN oncogene related to SRC, FGR, YES [Source:HGNC Symbol;Acc:4037] zzz999 Yes 2734 GLG1 golgi glycoprotein 1 [Source:HGNC Symbol;Acc:4316] zzz999 1809 DPYSL3 dihydropyrimidinase-like 3 [Source:HGNC Symbol;Acc:3015] T Yes 4660 PPP1R12B protein phosphatase 1, regulatory (inhibitor) subunit 12B [Source:HGNC Symbol;Acc:7619] T 57162 PELI1 pellino homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:8827] zzz999 2531 KDSR 3-ketodihydrosphingosine reductase [Source:HGNC Symbol;Acc:4021] T 8573 CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) [Source:HGNC Symbol;Acc:1497] zzz999 1583 CYP11A1 cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2590] zzz999 Yes 115399 LRRC56 leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:25430] zzz999 2801 GOLGA2 golgin A2 [Source:HGNC Symbol;Acc:4425] zzz999

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